Read in data from a Little Leonardo data Logger.


ncfile = read_ll3m(datapath,depid) % Matlab & Octave
Y  <- block_rms(X,n,nov)

Read in data from a Little Leonardo data Logger.

Input var Description Default value
datapath Path to directory containing the Little Leonardo raw binary (*.obj) and text files. For example 'C:/tag/lleo/mn12_186a' N/A
depid Deployment ID. This follows the same naming protocol as the DTag deployment naming protocol, for example mn12_186a. Where the first two characters indicate the species name (mn), the two digits immediately following indicate the year of the deployment (12 for 2012) followed by a underscore, next the Julian day of the deployment (186 for 4 July 2012), and finally a character indicating if it was the first or second deployment of the day (a in this case, i.e. the first deployment of the day. N/A
Output var Description Units
ncfile This functions generates a netCDF file called 'depid'_raw.nc containing the following variables: A Accelerometer data structure, M Magnetometer data structure, P Pressure sensor data structure, T Temperature sensor data structure, S Speed sensor (propeller) data structure, info Information structure for the deployment N/A

Matlab & Octave

datapath='C:\tagTools\testdata\mn12_186a'
depid='mn12_186a'
read_ll3m(datapath,depid)
loadnc([depid '_raw'])

The workspace should now contain variables A, M, P, T, S and info each of which is a structure. e.g.

Matlab output

A = 

  struct with fields:

                  data: [1172115Ă—3 double]
              sampling: 'regular'
         sampling_rate: 32
    sampling_rate_unit: 'Hz'
                 depid: 'mn12_186a'
         creation_date: '24-Jul-2017 12:40:14'
               history: 'read_ll3m'
                  name: 'A'
             full_name: 'Acceleration'
           description: 'triaxial acceleration'
                  unit: '1'
             unit_name: 'counts'
            unit_label: 'counts'
           column_name: 'x,y,z'
                 frame: 'tag'
                  axes: 'FRU'
                 files: '20120704-57537-Mn-XXXX-U-NoName-Acceleration…'

Octave output

If your output looks like this in Octave:

A
A =

  scalar structure containing the fields:
    
    data =
    
       2355   2071   1923
       2340   2052   1940
       2324   2058   1961
       ......
 -- less -- (f)orward, (b)ack, (q)uit

You need to set struct_levels_to_print(0), and it should now list all the first level structure names, see below. For details and information about the Sensor Data structure.

struct_levels_to_print(0)
A
A =

  scalar structure containing the fields:
  
    data: 1172115x3 matrix
    sampling: 1x7 sq_string
    sampling_rate: 1x1 scalar
    sampling_rate_unit: 1x2 sq_string
    depid: 1x9 sq_string
    creation_date: 1x20 sq_string
    history: 1x9 sq_string
    name: 1x1 sq_string
    full_name: 1x12 sq_string
    description: 1x21 sq_string
    unit: 1x1 sq_string
    unit_name: 1x6 sq_string
    unit_label: 1x6 sq_string
    column_name: 1x5 sq_string
    frame: 1x3 sq_string
    axes: 1x3 sq_string
    files: 1x150 sq_string 

R



bugs@animaltags.org Last modified: 10 May 2017

  • tagwiki/tools/io/readll3m.txt
  • Last modified: 2017/07/28 15:17
  • by funkyfinwhale